The peritrichous bacterium
Escherichia coli executes a random walk: an alternating sequence of runs (relatively long intervals during which the cell swims smoothly) and tumbles (relatively short intervals during which the cell changes course) (
8). A cell is propelled by several helical flagellar filaments, each attached by a hook (a universal joint) to a reversible rotary motor (
7). During runs, the filaments coalesce into a bundle that pushes the cell forward (
24). When viewed from behind the cell, the bundle rotates counterclockwise (CCW), and, to balance the torque, the cell body rotates clockwise (CW). Tumbles are initiated by CW motor rotation (
21). Based on studies of
Salmonella using dark-field microscopy, it was thought that the motors change direction synchronously, causing the bundle to fly apart (
24,
25). Based on studies using fluorescence microscopy, it became apparent that different filaments can change directions at different times and that a tumble can result from a change in direction of as few as one filament (
30). During a tumble, the reversed filament comes out of the bundle and transforms from normal (a left-handed helix with a pitch of 2.3 μm and a diameter of 0.4 μm) to semicoiled (a right-handed helix with half the normal pitch but normal amplitude) and then to curly 1 (a right-handed helix with half the normal pitch and half the normal amplitude). The change in direction of the cell's track generated by the tumble occurs during the transformation from normal to semicoiled, so at the beginning of the subsequent run, the cell swims for a time with left-handed filaments in a bundle turning CCW and a right-handed filament outside the bundle turning CW, both pushing the cell body forward. When the reversed motor switches back to CCW rotation, the single filament regains its normal conformation and rejoins the bundle. However, more exotic things can happen; for example, several filaments can undergo polymorphic transformations, and bundles can go directly from normal to curly 1 or from normal to a mixture of normal and semicoiled or curly 1 (
30). For recent reviews of bacterial motility and chemotaxis, see references
4 and
31, and for recent reviews of the flagellar rotary motor, see references
1,
6, and
11.
RESULTS
Rotation rates and swimming speeds for a sample of 50 to 100 cells, swimming in MB+ and MB+ with 0.18% methylcellulose, are shown in Table
1. Figure
1 shows a typical swimming cell to illustrate our measurement technique. CCW rotation of a normal left-handed bundle appeared as a wave propagating away from the cell body. The wave moved one wavelength between frames 0 and 5 (a time span of 0.01 s), indicating that the bundle rotation rate was ∼100 Hz. Figure
2 shows every fourth frame for the same cell; the cell body completed one revolution between frames 4 and 44 (a time span of 0.08 s), indicating that the body rotation rate was ∼12.5 Hz. In frame 4, the cell body angled toward the lower left corner of the frame and the bundle appeared to its left; in frame 24, the cell body angled toward the lower right corner of the frame and the bundle appeared to its right; in frame 44, the orientations were the same as those in frame 4. The flagellar bundle and the cell body must turn in opposite directions, since bundle and body torques balance (
5), so the flagellar motors were spinning at ∼112.5 Hz, the sum of the bundle and body rates. This cell swam at a speed of ∼25 μm/s.
In Fig.
3A, the swimming speeds shown in Table
1 are plotted as a function of bundle rotation rates for cells in MB+ and MB+ with 0.18% methylcellulose. In both media the relationship was approximately linear, with an average speed-to-rate ratio, called the
v-f ratio by Magariyama et al. (
27), of 0.180 μm in MB+ and 0.418 μm in methylcellulose. This indicates that bacteria translated about 8% and 18% of the flagellar pitch, respectively, per revolution of the flagellar bundle. That is, the cells moved 8% or 18% as fast as they would have moved if the flagella had bored through the medium without slip, i.e., like a corkscrew through a cork. For some bacteria, we also determined the counterrotation rate of the cell body, which is plotted as a function of the bundle rotation rate in Fig.
3B. Again, the relationships were approximately linear; the cell bodies rotated 0.171 and 0.311 times as fast as the flagellar bundles in MB+ and in MB+ with methylcellulose, respectively.
For a subset of the cells in Table
1, we generated a more complete data set that also included body length, bundle length, and body wobble angle (Table
2). We examined the extended data set for correlations between dynamic parameters (cell and bundle rotation rates, swimming speed, and body wobble) and also between dynamic parameters and cell geometry (bundle length, cell width, and cell length). One might expect that bundle length would correlate with either swimming speed or the bundle rotation rate, but we found no such relationship. Other than the dependence on the rotation rate (Fig.
3), the only additional important factor affecting swimming speed was the body wobble angle, which was anticorrelated with speed for cells swimming both in buffer and, less significantly, in methylcellulose. Only the bundle and motor rotation rates and, to a lesser extent, body wobble were affected by the addition of methylcellulose. The correlations between rotation rates and swimming speeds were significantly stronger for cells in methylcellulose than for cells in buffer.
Figure
4 shows 12 consecutive frames from a movie of a normal filament rotating in isolation on a stuck cell. In frames 0 through 3, the filament completed one CCW revolution, indicating that the rate was ∼167 Hz. The filament stopped between frames 4 and 5 and then rotated in the opposite direction, completing one CW revolution between frames 6 and 11 (∼100 Hz). We presumed that between frames 4 and 5 the motor changed direction and the hook unwound and then rewound in the opposite sense. This is an example of a filament that remained left-handed while being spun CW. Such events occurred infrequently, about once in 100 reversals. Although we observed several instances of CW-rotating filaments, in most cases the filament moved out of the focal plane, making its rotation rate difficult to measure.
Under our buffer conditions, the normal, left-handed form is the only stable filament geometry at rest. To cause the filament to change to another form, in particular to a right-handed form, force must be applied to it. Based on consideration of the signs of the torque involved, only CW rotation of a left-handed filament would “untwist” it toward the right-handed forms. Thus, motor reversal is required (although not sufficient, as shown in Fig.
4) to cause any polymorphic transformation of the normal form. Under our conditions, the right-handed forms are not stable at rest; they can be maintained only by the application of torque from CW rotation of the motor. We have never seen a right-handed, CW-rotating filament spontaneously revert to the normal form, although we presume that this would occur, even without a motor reversal, if the applied torque dropped significantly below the normal, fully energized level. When the torque changes sign, as it does upon motor reversal, the filament always goes back to normal. Motor reversal is required (and is sufficient) to cause helicity-changing polymorphic transformation of the right-handed forms. Certain mutations in the hook-associated protein at the base of the filament can upset this balance. For instance, in
sag mutants (mutants unable to swim in 0.28% agar but otherwise normal), CCW rotation can drive a normal filament to the left-handed straight form and CW rotation can drive a curly 1 filament to the right-handed straight form (
18).
Every reversal observed included a pause of at least one video frame between sequences of rotation; we have never seen an entire filament rotating CCW in one frame and CW in the next frame. It is possible for the distal end of a filament to stop rotating while a polymorphic transformation occurs in its proximal end, as shown in Fig.
5. Initially, such a filament rotated CCW at about 125 Hz, completing one revolution between frames 0 and 4, as indicated by the progression of the arrow toward the distal tip of the filament. In frames 5 through 9 the rotation appears to stop, and the most proximal portion of the filament changes its inclination with respect to the cell body, moving slightly to the left. In frames 10 through 14, the distal end of the filament remains stopped, while a short-pitch region of transformed filament appears (indicated by an arrow in frame 14); compare the proximal filament positions in frames 1 and 14. All helices with shorter-than-normal pitch and a small radius are right-handed (
13); therefore, the change in helicity that we observed must have been caused by a period of CW rotation of the motor. The total length of this pause (eight frames, or 0.016 s) is consistent with the winding up of the flagellar hook and the accumulation of added twist in the transformed segment. In subsequent frames the filament resumed CCW rotation (not shown).
Table
3 shows the results of measurement of 24 normal filaments rotating in isolation on cells that were stuck to a glass surface. As shown by these data and the fits illustrated in Fig.
6, the shapes of spinning and stopped filaments were indistinguishable.
DISCUSSION
Following Magariyama et al. (
27), we applied resistive force theory (
20) to the single-filament data in Table
3, with a swimming speed (
v) of 0. We used a filament angular velocity (ω) of 2π × 111 Hz, a helix radius (
r) of 0.2 μm, a helix pitch (
P) of 2.22 μm, a filament radius (ρ) of 0.012 μm, and a filament contour length (
L) of 7.1 μm, obtaining a filament torque of 370 ± 100 pN nm. Motors run at nearly constant torque up to frequencies of about 175 Hz (
15), so it is puzzling that this value is >10-fold less than the stall torque for the flagellar motor measured with optical tweezers (
10), ∼4,600 pN nm. This discrepancy led us to examine more recent estimates for motor torque obtained by spinning latex beads on flagellar stubs. Working within the low-speed, high-torque limit with spheres whose diameters ranged from 1.0 to 2.1 μm, Fahrner et al. (
19) obtained rotation speeds ranging from 78 to 8.6 Hz. These measurements yielded a mean torque of 1,370 ± 50 pN nm, in agreement with the value of 1,260 pN nm obtained recently using rotating 1-μm beads (
28), which we believe to be closer to the mark; however, this value is still substantially larger than 370 pN nm. Thus, either the resistive force theory predicts a torque that is too low, or a substantial burden is imposed by rotation of the filament near a glass surface. According to resistive force theory, the drag coefficient of an isolated, translating helix is inversely proportional to ln(2
p/ρ) − 0.5 (
27). When the helix is placed close to a surface, hydrodynamic shielding by the surface changes this expression to ln(2
l/ρ), where
l is the distance to the surface (
22). A 4-fold or 12-fold increase in the drag coefficient, which would bring the single-filament torques into agreement with the previously described torque (1,370 pN nm or 4,600 pN nm), corresponds to a proximity of 0.02 μm or 0.01 μm. These distances are rather small (approximately 1/10 the radius of the helix), but not impossibly so.
The filament is sufficiently stiff that we were not able to detect differences in the shape of a normal filament when it was spinning or stopped, as shown in Table
3 and Fig.
6. Based on a simple elastic model of the filament (
16), the axial force (
F) and torque (Γ) required to deform a filament with natural, unstressed pitch (
p0 ) and radius (
r0 ) to a new pitch (
p) and radius (
r) are
where
EI is the flagellar stiffness. Since the forces are generated or dissipated uniformly along the length of the rotating filament,
F, on average, is half of the thrust generated by the filament, and Γ, on average, is half of the torque applied by the motor. If we take the natural pitch and radius from the data for the stopped filaments (Table
3) and account for uncertainties by allowing a range of axial forces and torques (0.25 pN <
F < 0.85 pN and −1,500 pN nm < Γ < −300 pN nm) and a three-standard-deviation range for the CCW form parameters (2.19 μm <
p < 2.37 μm and 0.17 μm <
r < 0.23 μm), a self-consistent set of numbers requires that the flagellar stiffness be greater than 5.5 pN μm
2. This is reasonably consistent with the measured stiffness, 3.5 pN μm
2 (
16).
The hook is known to be more flexible than the filament; in fact, it changes its twist by about one full turn during a motor reversal (
12). The transformation from normal to semicoiled involves supertwisting by about 3 rad/μm or about 1.25 turns per pitch (
13); at a motor speed between 300 and 100 Hz, transformation of a single pitch would require between 0.008 and 0.022 s. Thus, the first few rotations of the motor can be absorbed by the hook plus a polymorphic change of the proximal end of the filament, without requiring the distal end to rotate much at all, consistent with Fig.
5. If the CW interval is short enough, when the motor again turns CCW, the polymorphed sections simply propagate back down the filament and are reabsorbed into the hook. In a swimming bacterium such a brief motor reversal would not interfere with rotation of the bundle or alter the cell's trajectory and would probably be undetectable with current microscopic techniques.
Why is the single-filament rotation rate (111 Hz) (Table
3) so similar to the bundle rotation rate (130 Hz) (Table
1)? In our previous study of fluorescent flagellar filaments (
30), cells of the same strain grown in the same way produced an average of 3.4 filaments per cell. This is consistent with our observations of these swimming cells, where we could usually distinguish at least three separate filaments in a bundle. At a mean motor rate of 166 Hz (Table
1), all these flagella should be running in a constant-torque regimen (
15). Consider four filaments forming a compact bundle. If interactions between these filaments can be ignored, the hydrodynamic properties of the bundle should be similar to those of a single filament with roughly twice the diameter. The viscous load depends only logarithmically on this diameter, so it should be roughly 15% larger. Additionally, the bundle speed is about 15% higher than the single-filament speed, so the total torque supplied by all four motors driving the bundle is only 30% higher than the single-motor torque; i.e., each motor operates at about 32% of the single-motor torque. For a fully assembled motor operating in a fully energized cell, one would not expect to see such a dramatic torque reduction unless the motor were operating at around 300 Hz, well above the “knee” frequency (
15). We believe that the motors in a swimming cell do, in fact, deliver close to peak torque but that the effective drag of the bundle is much larger than the calculation described above suggests. Either the bundle has an effective hydrodynamic radius that is 30 times larger than the single-filament radius (much looser than has been imagined [
24]), or the filaments in multiply flagellated cells generate substantial internal drag. Even if the filaments were in very close contact (average separation of one filament radius, 12 nm), they would dissipate little extra power (
7), but such dissipation could be accomplished by flagella dragging over the surface of the cell. A cell with a single filament can always orient itself so that the flagellum rotates clear of the body, but any additional filaments, which usually arise from points far from the axis of rotation, generally have to cross the cell body during rotation. Unlike the drag between two thin filaments, the drag against a large surface can be substantial, so added torque contributed by additional flagella might be dissipated against the cell body.
If they do not allow the cell to swim faster, why does a cell have multiple flagella? One possible explanation is that having “extra” flagella allows cells to maintain motility while dividing quickly. There is a lag of several generations between turning on flagellar synthesis and completing the first new flagellum (
2). If cells did not have a reservoir of flagella when they start a growth spurt (e.g., when they encounter a newly rich medium), cell division during this lag period would produce many unflagellated, nonmotile cells. Another possibility, assuming that a cell with a single flagellum swims poorly unless that flagellum is at a cell pole, is that inserting several flagella at random points on the cell surface is easier than building a specific motor mount at one pole. Yet another possibility is that having multiple, distributed flagella allows cells to change directions more efficiently when they tumble, i.e., to try a new direction at random (
8) rather than just back up (
29), which searches some but not all (
17) environments more efficiently.
We believe that the last factor, namely, the connection between the presence of multiple, distributed flagella and searching efficiency, is an essential component of bacterial taxis, so we hope to understand the tumbling process in
E. coli in detail. Since the flagellar bundle has the largest hydrodynamic size, its orientation determines the direction of cell motion. Any motor reversal (CCW to CW) results in deflection of the cell from this trajectory, unless the motor happens to be located in line with the bundle axis. In a previous study (
30), we found that normal-to-semicoiled transformation of a filament resulted in deflection of the cell body during tumbles (
4). Using the high-speed camera, we were able to confirm these events. A motor reversal (CCW to CW) causes the filament to pause and then change its direction of rotation. This deflects the cell body and unwinds the filament from the bundle. The small initial deflection of the cell body is reversed as the filament transforms to the right-handed semicoiled form, changing the thrust that the filament exerts on the cell body. The tumble usually ends with the conversion of the semicoiled form to the curly 1 form, followed later by a motor reversal (CW to CCW), causing the filament to transform back to its normal form and rejoin the bundle, as shown in Fig.
7. Although this is our best reconstruction of the canonical tumble, other endings are possible. For example, if the second motor reversal (CW to CCW) occurs while the filament is still in the semicoiled form, the filament transforms directly from semicoiled back to normal, skipping the curly form entirely.
We applied resistive force theory (
20,
27) to the data obtained with free-swimming cells and found that the torque required to spin the filaments is roughly the same as the torque required to spin the cell body. Assuming the same helix radius and pitch as before (0.2 μm and 2.22 μm), but treating the bundle as a single a filament having twice the radius (0.024 μm), for the 32 cells in Table
2 we obtained a bundle torque (Γ
bundle) of 650 ± 220 pN nm, a bundle thrust (
F bundle) of 0.41 ± 0.23 pN, a body torque (Γ
body) of 840 ± 360 pN nm, and a body drag (
F body) of 0.32 ± 0.08 pN. Chattopadhyay et al. (
14) used an optical trap to measure the propulsion matrix, which connected bundle torque and bundle thrust to swimming speed and bundle angular velocity, as Γ
bundle = −B
v + Dω and
F bundle = −A
v + Bω. Using the values of Chattopadhyay et al. for A, B, and D with our measured swimming speed and bundle rate gives a Γ
bundle value of 550 pN nm and an
F bundle value of 0.28 pN, in agreement with our values for these parameters. In our calculations, the body was assumed to be a prolate ellipsoid with the length and width shown in Table
2, rotating about the bundle axis at angular velocity Ω at distance
m from the body center along the cell major axis, with the axes forming an angle (θ) equal to half the wobble angle, as shown in Fig.
8. The expression for the viscous drag of the cell body averaged about the bundle axis, adapted from a solution kindly provided by Tobias Löcsei and John Rallison of Cambridge University, yields a force resisting the translation of magnitude
F body =
v(A
1sin
2θ + A
2cos
2θ) and a torque resisting the rotation of magnitude Γ
body = Ω[(D
1 +
m2A
1) sin
2θ + D
2cos
2θ]. With viscosity η, eccentricity
e [
e = (
a 2 −
b 2)
1/2/
a], and
E = ln[(1 +
e)/(1 −
e)], the values of the coefficients are:
A1 = 32πηae 3/[(3e 2 − 1)E + 2e]
A2 = 16πηae 3/[(1 + e 2)E − 2e]
D1 = 32πηab 2 e 3(2 − e 2)/3(1 − e 2)[(1 + e 2)E − 2e]
D2 = 32πηab 2 e 3/3[2e − (1 − e 2)E]
For each cell, we obtained two independent measurements of torque and force; one measurement was based on resistive force theory applied to the flagellar bundle, and the other measurement was based on the motion of the cell body. Although, as indicated above, the population averages agree quite well, there is considerable scatter on a cell-by-cell basis. Individual cells' body and bundle torques appear to be uncorrelated (Fig.
9A), perhaps due to the larger scatter in the measured values of body torque. In a typical calculation for the bundle thrust (
F bundle), the majority of the useful propulsive force produced by rotation (
F propulsion = B
ω) is immediately dissipated by dragging the large bundle behind the cell (
F self-drag = A
v). Since the bundle thrust is the difference between two large numbers, it has a large experimental error, and the points in a plot of individual cells' bundle thrust versus body force (
F bundle = −
F self-drag +
F propulsion versus
F body), analogous to Fig.
9A, appear to be uncorrelated. Instead, we plotted the propulsive force versus the total drag (
F propulsion versus
F body +
F self-drag) in Fig.
9B. This figure shows that there was modest correlation and roughly equal scatter along the two axes.
For cells swimming in methylcellulose, the calculated bundle and body forces do not coincide. This is not surprising, since solutions of methylcellulose are known to have a non-Newtonian viscosity (
9). When a cell propelled by a constant-torque motor is subjected to a simple increase in viscosity, its rotation rate and swimming speed should decrease in proportion to η. Table
1 shows that this does not occur when viscosity is tripled by adding methylcellulose. Only the cells' bundle and motor rotation rates are substantially decreased; the body rotation rate is unaffected, and the cell speed actually increases. This qualitatively agrees with the predictions of an anisotropic viscosity model of swimming in methylcellulose (
26).
In summary, assuming the validity of resistive force theory and neglecting interactions with nearby surfaces, we estimated the torque generated by an isolated filament to be ∼400 pN nm, a value substantially lower than current estimates of motor torque. Filaments are quite stiff; changes in shape between spinning filaments and stationary filaments were not detected. The torque generated by a flagellar bundle is surprisingly small, ∼700 pN nm. Evidently, a substantial fraction of the torque supplied by the several motors that drive a bundle is dissipated through internal friction within the bundle or between the bundle and the cell wall. However, the torque and thrust generated by the bundle are balanced, as they should be, by the drag computed for the cell body. Even though additional filaments in a bundle might not add much to a cell's speed, they are useful for reorientation during tumbling. CW rotation often, although not always, triggers a polymorphic transformation to a right-handed filament form. This transformation plays an important role in generating changes in the direction of swimming.