INTRODUCTION
Tuberculosis (TB), caused by
Mycobacterium tuberculosis, is the second greatest infectious cause of death worldwide after HIV, accounting for 1.3 million deaths in 2012 (
1). The only available vaccine,
Mycobacterium bovis bacillus Calmette-Guérin (BCG), protects infants from disseminated forms of TB but has insufficient and inconsistent efficacy in protecting adults from pulmonary TB (
1,
2). A vaccine preventing active pulmonary TB, the contagious form of the disease, would greatly impact the epidemic (
3), and a better understanding of vaccine-induced mechanisms of protection is essential in developing new surrogate endpoints (
4).
Both CD4
+ Th1 (gamma interferon-positive [IFN-γ
+]) cells and CD8
+ T cells are critical for protection against TB (
5). Specifically, CD4
+ IFN-γ
+ interleukin 2-positive (IL-2
+) tumor necrosis factor α-positive (TNF-α
+) polyfunctional T cells have been proposed as a correlate of vaccine-induced protective immunity in murine infection models (
6). In infants, BCG vaccination induced specific cytokine expression in CD4
+ and CD8
+ T cells (
7–9), including IFN-γ
+ IL-2
+ TNF-α
+ polyfunctional CD4
+ T cells (
10). However, there was no relation between the presence of such cells and the development of TB during follow-up (
11).
In adults, BCG vaccination induced CD4
+ IFN-γ
+ responses (
12–14) as well as IFN-γ- and TNF-α-secreting CD8
+ T cells with cytotoxic activity (
15). However, data on the induction of polyfunctional T cells by BCG vaccination in adults have been conflicting (
16,
17). In one report, the induction of polyfunctional CD4
+ T cells was similar in magnitude in BCG-vaccinated infants and adults; however, when induction was analyzed as the proportion of polyfunctional versus single-cytokine-producing T cells, the proportion of polyfunctional CD4
+ T cells was larger in children than in adults (
16). Further, studies on latent (controlled) versus active TB in adults yielded variable results on changes in mono- and triple-cytokine-producing T cell subsets (
18,
19), such that it was suggested that polyfunctional T cells are also present in active TB disease and that these cells are not a surrogate marker of protection against TB in humans (
19,
20).
Another explanation for the inconsistent protection induced by BCG against TB in adults is the induction of regulatory T cells (Tregs) by mycobacteria, which can dampen proinflammatory responses (
21). In that context, we reported that live BCG triggers the specific activation of CD8
+ (but not CD4
+) Tregs from peripheral blood mononuclear cells (PBMCs) of mycobacterial purified protein derivative (PPD)-responsive adults (
22), while others found that BCG vaccination induced CD4
+ Tregs in newborns (
23) and adults (
24). Here, in a small, well-defined cohort of previously BCG-naive adults, we studied the induction of multiple-cytokine-producing and regulatory T cell subsets following BCG vaccination.
MATERIALS AND METHODS
Participants.
Dutch volunteers were recruited via posters in the university library. All volunteers were screened for tuberculosis by anamnesis (history of TB disease or treatment), by a tuberculin skin test (TST; negative, <5 mm), and by the QuantiFERON TB gold in-tube test according to the manufacturer's specifications. Included volunteers (n = 6 males, n = 6 females; median age, 24 years [interquartile range (IQR), 23 to 25 years]; median weight, 70 kg [IQR, 67 to 80 kg]; all Dutch, all Caucasian) had not been vaccinated with BCG at any time prior to entering the trial (anamnestic, presence of scar, or described on a vaccination card), were never treated for TB disease, and had negative TST and QuantiFERON test results. In addition, they did not receive any live vaccination at ≤4 weeks prior to BCG vaccination. Volunteers were excluded who were pregnant or not generally healthy, who had fever or received antibiotic treatment ≤2 weeks prior to enrollment, or who were treated with immune-modulating drugs ≤3 months prior to enrollment; all volunteers tested negative for HIV at screening.
Procedures.
Participants were vaccinated with the live attenuated BCG Danish strain 1331 (Statens Serum Institut, Denmark) by intradermal injection in the upper arm and were followed up prospectively at 2 weeks prior to vaccination, at the day of vaccination, at 1, 3, and 7 days after vaccination, at 4, 8, and 12 weeks after vaccination, and at 1 year after vaccination. During follow-up, the injection site was inspected and photographed, and adverse events were recorded using a standardized case report form. Venous blood samples were collected in heparin-containing vacutainers for whole-blood stimulation assays and for PBMC isolation and cryopreservation according to standard operating procedures. Serum samples were collected from serum tubes after blood coagulation and stored at −80°C.
Calculation of skin inflammation score.
Signs of inflammation by visual inspection of the vaccination site and symptoms recorded in volunteer diaries were documented on standardized case report forms and photographed at 4, 8, and 12 weeks after vaccination. The local reaction was scored by two researchers (M.C.B. and C.P.) independently, with one point per sign of inflammation: redness of ≥1 cm, swelling of ≥1 cm, pus discharge and ulceration, pain, and regional lymph node enlargement (>90% consensus; disagreements were solved by mutual reexamination of case report forms, photographs, and volunteer diaries). The inflammation score was calculated as the cumulative scores of weeks 4, 8, and 12 after vaccination.
C-reactive protein enzyme-linked immunosorbent assay.
The serum samples of all prevaccination and postvaccination visits were thawed, and the C-reactive protein (CRP) concentration was measured using a standardized, highly sensitive, CRP human enzyme-linked immunosorbent assay (ELISA) according to the instructions of the manufacturer (Abnova, Heidelberg, Germany).
Whole-blood live BCG stimulation.
Bacillus Calmette-Guerin (Pasteur) was grown in 7H9 plus ADC, frozen in 25% glycerol, and stored at −80°C. Before use, the bacteria were thawed and washed in phosphate-buffered saline (PBS)–0.05% Tween 80 (Sigma-Aldrich). Then, 1 ml of heparinized blood was added within 1 h of blood collection to Sarstedt microtubes (Sarstedt B.V., Etten-Leur, The Netherlands) containing 0.9 × 10E6 CFU (calculated multiplicity of infection [MOI] of 3) and anti-CD28 and anti-CD49d antibodies as costimulants (1 μg/ml; BD Biosciences, Eerembodegem, Belgium) (
25) and immediately incubated at 37°C. Staphylococcal enterotoxin B (SEB) (final concentration, 5 μg/ml; Toxin Technology, Sarasota, FL, USA) and unstimulated samples were used as controls. After 3 h, brefeldin A (10 μg/ml; Sigma-Aldrich, Zwijndrecht, The Netherlands) and monensin (1:1000; BD Biosciences) were added, and samples were transferred to a water bath set at 37°C and programmed to switch off after 12 h. Samples were harvested the next morning using EDTA (2 mM; Sigma-Aldrich), fixed and erythrocyte-lysed using a fluorescence-activated cell sorter (FACS) lysing solution (BD Biosciences), and cryopreserved in fetal calf serum with 10% dimethyl sulfoxide (DMSO) (
25).
Cell cultures and BCG infection.
PBMCs were thawed, and cells were counted using the Casy cell counter (Roche, Woerden, The Netherlands). Infections were done at an MOI of 1.5. SEB (final concentration, 2 μg/ml; Toxin Technology) and unstimulated samples were used as controls. The PBMCs were cultured in 24-well plates (2 × 10E6/well) for 6 days in Iscove's modified Dulbecco's medium (Life Technologies-Invitrogen, Bleiswijk, The Netherlands) with 10% pooled human serum. For flow cytometric analysis, the PBMCs were incubated for the last 16 h with αCD3/28 beads (Invitrogen) and brefeldin A (3 μg/ml; Sigma-Aldrich).
Lymphocyte stimulation assays were performed using PBMCs (0.5 × 10E6/well in 48-well plates) and stimulation with 5 μg/ml PPD (Statens Serum Institut, Copenhagen, Denmark) at 37°C and 5% CO2. Phytohemagglutinin (PHA) (final concentration, 2 μg/ml; Remel Europe) and unstimulated samples were used as controls. After 7 days, the supernatants were collected and an IFN-γ ELISA (U-CyTech, Utrecht, The Netherlands) was performed.
Direct IFN-γ enzyme-linked immunosorbent spot (ELISpot) assays were performed at 1 year postvaccination: 250,000 freshly isolated PBMCs were added in an AIMV (synthetic nonhuman serum supplemented) medium (Invitrogen) to 96-well ELISpot plates (Millipore, Bedford, MA, USA) that were precoated with anti-IFN-γ antibody (1-D1K, 5 μg/ml; Mabtech, Stockholm, Sweden) and blocked with AIMV. The PBMCs were stimulated overnight with PHA (2 μg/ml), PPD (5 μg/ml), or an antigen 85B (Ag85B) peptide pool (1 μg/ml) in triplicate (
26). For detection, biotinylated anti-IFN-γ antibody (0.5 μg/ml; Mabtech), streptavidin-alkalic phospatase conjugate (1:1,000 dilution in 1% bovine serum albumin [BSA]-PBS; Mabtech IFN-γ ELISpot kit reagent), and a SigmaFast NBT-BCIP substrate (Sigma-Aldrich) were used. Positivity for vaccine take (
27) was defined as an increase of ≥100% of the average count in PPD-stimulated wells compared to unstimulated controls and at least 5 spots more than in unstimulated controls (
28).
Flow cytometry.
Fixed whole-blood samples were thawed and stained in batches. Surface staining included CD3-Brilliant Violet 570 (clone UCHT1), CD19-Pacific Blue (clone HIB19), and CD56-Brilliant Violet 421 (clone HCD56) (all Biolegend, London, United Kingdom); CD14-Pacific Blue (clone TüK4) and CD4-phycoerythrin (PE)-Texas Red (clone S3.5) (both Life Technologies-Invitrogen); and CD8-HorizonV500 (clone RPA-T8), CD45RA-allophycocyanin (APC)-H7 (clone HI100), and CD62L-Brilliant Violet 605 (clone DREG-56) (all BD Biosciences). For intracellular staining, IL-17A-fluorescein isothiocyanate (clone eBio64DEC17; eBioscience, Hatfield, United Kingdom); IFN-γ Alexa Fluor 700 (clone B27), TNF-α-APC (clone 6401.1111), IL-4-PE (clone 3010.211), and CD69-PeCy5 (clone FN50) (all BD Biosciences); and IL-2-Brilliant Violet 650 (clone MQ1-17H12), IL-10-Pe-Cy7 (clone JES3-9D7), and IL-13-PE (clone JES10-5A2) (all Biolegend) were used in a permeabilization solution (Fix&Perm cell permeabilization kit; An Der Grub BioResearch GMBH, Susteren, The Netherlands).
The stimulated PBMCs were labeled with violet LIVE/DEAD stain (Vivid, Invitrogen) and surface stained with CD3-Brilliant Violet 570 (clone UCHT1), CD19-Pacific Blue (clone HIB19), CD56-Brilliant Violet 421 (clone HCD56), and CD39-PE (clone A1) (all Biolegend, London, United Kingdom); CD14-Pacific Blue (clone TüK4) and CD4-PE-Texas Red (clone S3.5) (both Life Technologies-Invitrogen); and CD8-HorizonV500 (clone RPA-T8; BD Biosciences). Cells were fixed and permeabilized using the Fix&Perm cell permeabilization kit (An Der Grub BioResearch GMBH). For intracellular staining, the following antibodies were used: CC chemokine ligand 4 (CCL4)-fluorescein isothiocyanate (clone 24006; R&D Systems, Abingdon, United Kingdom), Foxp3-Alexa Fluor 700 (clone PCH101; eBioscience), lymphocyte activation gene (LAG)-3-atto 647N (clone 17B4; Enzo Life Sciences, Antwerp, Belgium), and CD25-allophycocyanin-H7 (clone M-A251; BD Biosciences).
Samples were acquired on a BD LSRFortessa using FACSDiva software (version 6.2; BD Biosciences) with compensated parameters. The analysis was performed using FlowJo software (version 9.5.3; Treestar, Ashland, OR, USA), and gates were synchronized per donor for all visits and for both CD4+ and CD8+ T cell subsets, using the comparison with unstimulated samples and SEB as controls.
Statistical analyses.
GraphPad Prism (version 6; GraphPad Software, La Jolla, CA, USA) and SPSS statistical software (version 20; SPSS IBM, Armonk, NY, USA) were used for the Wilcoxon signed-rank tests and Mann-Whitney tests. To correct for paired and unpaired multiple testing, Friedman tests followed by Dunn's multiple comparisons tests and Kruskal-Wallis tests followed by Dunn's multiple comparisons tests, respectively, were used. Only the values significant after multiple-testing correction are demonstrated.
Study approval.
Approval was obtained from the medical ethical committee (registration number P 12.87) of the Leiden University Medical Center, The Netherlands. Each participant signed written informed consent prior to inclusion.
DISCUSSION
In this study, we describe high interindividual variability in T cell cytokine and regulatory responses following BCG vaccination of BCG-naive healthy young adults in a setting where TB is not endemic. The unexpectedly dichotomous T cell response consisted of either concurrent induction of IL-2-, TNF-α-, and IFN-γ-coexpressing polyfunctional CD4+ T cell subsets, CD4+ IL-17A+ T cells, and CD8+ IFN-γ+ T cells in high inflammation responders or an almost absent cytokine response accompanied by the induction of CD8+ regulatory T cells in low inflammation responders. We quantified local reactivity by classical clinical symptoms of inflammation and found that the total skin inflammation score correlated with serum CRP concentration early postvaccination. Significant induction of IFN-γ+ IL-2+ TNF-α+ polyfunctional CD4+ T cells was confined to high inflammation responders, while the induction of regulatory-phenotype CD8+ CD25+ CD39+ Foxp3+ and CD8+ CD25+ Foxp3+ CD39+ LAG-3+ CCL4+ T cells was confined to low inflammation responders.
In theory, this study could have been limited by the description of T cell responses based on the skin inflammation score, since dividing high and low skin inflammation groups using the median as a cutoff dichotomizes the described response. However, the dichotomy was also based on the induction of polyfunctional CD4
+ IFN-γ
+ IL-2
+ TNF-α
+ T cells, and this revealed a significantly increased total skin inflammation score in vaccinees with CD4
+ polyfunctional T cells compared to vaccinees with no polyfunctional CD4
+ T cell induction. Thus, it is unlikely that the described variability in responses is caused by a dichotomized representation, and this further affirms the relation between skin reactivity and cytokine responses. Further, the opposing immune responses and phenotypes were observed within a relatively small cohort. Variability in BCG immunogenicity has been ascribed to differences in preexisting antimycobacterial responses in settings where disease is endemic versus nonendemic (
36,
37), the presence of helminth infections (
38), variations in the BCG vaccine strain (
39,
40), and host genetic factors (
41). In addition, timing of sampling and technical variability may influence the detection of cytokines (
42,
43). This cohort, though small, was uniform in terms of age, genetic background, BCG vaccine strain (Danish strain 1331), sampling, and testing in a setting not endemic for TB or helminth infections. This excludes the above-mentioned possible confounders and points to an unexpectedly large variation in adult human primary BCG vaccine-induced immune responses.
Importantly, we confirmed vaccine take at 1 year postvaccination by IFN-γ ELISpot, which was positive for both high and low inflammation responders. IFN-γ-ELISpot has been described as the most sensitive assay for detecting long-term vaccine responses (
29) and is used in TB vaccine trials to describe the magnitude of vaccine-induced immunity. However, a sole reliance on IFN-γ ELISpot would disregard variability in other assays, thereby not fully capturing possible correlations between variation of the human immune response and vaccine-induced protection. The etiology of this variation remains unknown, but its unraveling could contribute significantly to a better understanding of BCG and related TB vaccine-induced immunity.
The height of the
in vitro cytokine response in BCG-vaccinated infants was associated with scarring of the BCG vaccination site but only in response to mycobacterial antigens, not unrelated antigens (
44). Also, cell-mediated immunity, as assessed by a leukocyte migration inhibition test, correlated with infant local skin reactivity 8 weeks after BCG vaccination, but not with TST conversion after vaccination (
45). The absence of an association between BCG-induced TST conversion and immunity against TB has been confirmed in various populations (
46). Here, induction of cytokine responses was confined to recipients with high skin reactivity, suggesting that a simple phenotype like vaccine-induced skin inflammation might be used as a marker of strong proinflammatory T cell induction in adults. The skin inflammation score was associated with the serum CRP concentration 7 days postvaccination; thus, the absence of an increase in CRP early postvaccination might be used as an indicator of absent proinflammatory T cell responses at later time points.
Interference of CD4
+ Tregs with effector immunity has been described in active TB (
47,
48). Following MVA-85A vaccination, circulating CD4
+ CD25
+ Foxp3
+ T cells were increased in recipients with low antigen 85A-specific IFN-γ responses compared to high IFN-γ responses (
28), and MVA-85A-induced CD4
+ Tregs inhibited IL-17A production
in vitro (
49). Interestingly, IL-10-producing CD8
+ Tregs were described in TB patients anergic to intradermally injected PPD (
50). Thus, Tregs can interfere with inflammatory and specific antigen-induced cytokine responses. We previously reported
in vitro activation of CD8
+ (but not CD4
+) Tregs by live BCG, both phenotypically and functionally, in mycobacterially sensitized but not PPD-unresponsive donors (
22,
34,
35). These BCG-activated CD8
+ Tregs expressed CD25 and LAG-3 and inhibited Th1 responses through secretion of CCL4 (
35); in addition, we reported CD8
+ CD39
+ Tregs which utilized CD39 to suppress Th1 proliferation (
34). Here, we found that CD8
+ CD25
+ CD39
+ Foxp3
+ and CD8
+ CD25
+ Foxp3
+ CD39
+ LAG-3
+ CCL4
+ T cells were induced following BCG vaccination. Interestingly, the frequency of CD8
+ T cells with these Treg phenotypes was significantly increased only in comparison to that at prevaccination in low inflammation responders with low to absent cytokine responses, suggesting an inverse relation between the induction of CD8
+ Tregs and BCG-induced skin inflammation with T cell cytokine production.
In murine leishmaniasis, cytokine-producing polyfunctional T cells were inversely correlated with lesion size after (dermal) challenge (
6). In dermal BCG challenge models in humans, vaccination-induced IFN-γ ELISpot responses were inversely correlated with PCR quantification of the BCG load in biopsy specimens of the challenge site (
51). The PCR quantification method was suggested as a measure of pathogen clearance, possibly reflecting some degree of protective immunity, which might be used in human TB vaccine trials. Based on the current study, it will also be relevant to assess the presence of proinflammatory versus regulatory T cells in skin vaccine or challenge lesions and to further validate the modulation of skin inflammation and/or pathogen clearance by CD8
+ Tregs in relevant models. Of note, in low inflammation responders, CD8
+ CD25
+ Foxp3
+ CD39
+ T cells were still significantly increased at 1 year postvaccination, suggesting that BCG vaccination can induce long-term imprinting of a CD8
+ Treg phenotype with a significant memory component. Further work is needed to assess their precise longevity.
In conclusion, our results show an unexpectedly dichotomous host response to BCG vaccination in a cohort of BCG-naive adults. It will be important to assess these divergent outcomes in settings where TB is endemic in order to determine the impact of these highly variable outcomes on protective efficacy against TB. The use of classical inflammation markers as nonclassical indicators of vaccine-induced proinflammatory responses might be a simple means to assist in assessing BCG-induced phenotypes, even in small cohorts. Further detailed fine mapping of the heterogeneous host response to BCG vaccination using classical and nonclassical immune markers will enhance our understanding of the mechanisms and determinants that underlie the induction of apparently opposite immune responses and how these impact the ability of BCG to induce protective immunity to TB.
ACKNOWLEDGMENTS
This work was supported by EC FP7 NEWTBVAC (contract HEALTH.F3.2009 241745), EC FP7 ADITEC (contract HEALTH.2011.1.4-4 280873), EC FP7 IDEA (grant agreement 241642), and TBVAC2020 Horizon2020 (contract 643381), and by The Netherlands Organization for Scientific Research (VENI grant 916.86.115), the Gisela Thier Foundation of the Leiden University Medical Center, and the Netherlands Leprosy Foundation.
The text represents the authors' views and does not necessarily represent a position of the Commission, which will not be liable for the use made of such information. The funders had no role in study design, data collection, or analysis, the decision to publish, or preparation of the manuscript.
We thank all the volunteers for participating in this study, and we thank Louis Wilson for providing BCG cultures.